prokka_result - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIDLOFKIB_1 (original name was: gnl|Prokka|IDLOFKIB_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	147,522	188,691

gnlProkkaIDLOFKIB_13 (original name was: gnl|Prokka|IDLOFKIB_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	cyclic-lactone-autoinducer	186,530	207,235

gnlProkkaIDLOFKIB_28 (original name was: gnl|Prokka|IDLOFKIB_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	terpene	30,280	51,161

gnlProkkaIDLOFKIB_36 (original name was: gnl|Prokka|IDLOFKIB_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	66,905	79,055

Region	Type	From	To	Similarity
Region 1.1	T3PKS	147,522	188,691
Region 13.1	cyclic-lactone-autoinducer	186,530	207,235
Region 25.1	terpene	30,280	51,161
Region 31.1	RiPP-like	66,905	79,055

No secondary metabolite regions were found in these records:: gnlProkkaIDLOFKIB_2 (original name was: gnl|Prokka|IDLOFKIB_2); gnlProkkaIDLOFKIB_3 (original name was: gnl|Prokka|IDLOFKIB_3); gnlProkkaIDLOFKIB_4 (original name was: gnl|Prokka|IDLOFKIB_4); gnlProkkaIDLOFKIB_5 (original name was: gnl|Prokka|IDLOFKIB_5); gnlProkkaIDLOFKIB_6 (original name was: gnl|Prokka|IDLOFKIB_6); gnlProkkaIDLOFKIB_7 (original name was: gnl|Prokka|IDLOFKIB_7); gnlProkkaIDLOFKIB_8 (original name was: gnl|Prokka|IDLOFKIB_8); gnlProkkaIDLOFKIB_9 (original name was: gnl|Prokka|IDLOFKIB_9); gnlProkkaIDLOFKIB_10 (original name was: gnl|Prokka|IDLOFKIB_10); gnlProkkaIDLOFKIB_11 (original name was: gnl|Prokka|IDLOFKIB_11); gnlProkkaIDLOFKIB_12 (original name was: gnl|Prokka|IDLOFKIB_12); gnlProkkaIDLOFKIB_14 (original name was: gnl|Prokka|IDLOFKIB_14); gnlProkkaIDLOFKIB_16 (original name was: gnl|Prokka|IDLOFKIB_16); gnlProkkaIDLOFKIB_18 (original name was: gnl|Prokka|IDLOFKIB_18); gnlProkkaIDLOFKIB_19 (original name was: gnl|Prokka|IDLOFKIB_19); gnlProkkaIDLOFKIB_20 (original name was: gnl|Prokka|IDLOFKIB_20); gnlProkkaIDLOFKIB_21 (original name was: gnl|Prokka|IDLOFKIB_21); gnlProkkaIDLOFKIB_22 (original name was: gnl|Prokka|IDLOFKIB_22); gnlProkkaIDLOFKIB_24 (original name was: gnl|Prokka|IDLOFKIB_24); gnlProkkaIDLOFKIB_25 (original name was: gnl|Prokka|IDLOFKIB_25); gnlProkkaIDLOFKIB_26 (original name was: gnl|Prokka|IDLOFKIB_26); gnlProkkaIDLOFKIB_27 (original name was: gnl|Prokka|IDLOFKIB_27); gnlProkkaIDLOFKIB_29 (original name was: gnl|Prokka|IDLOFKIB_29); gnlProkkaIDLOFKIB_30 (original name was: gnl|Prokka|IDLOFKIB_30); gnlProkkaIDLOFKIB_33 (original name was: gnl|Prokka|IDLOFKIB_33); gnlProkkaIDLOFKIB_34 (original name was: gnl|Prokka|IDLOFKIB_34); gnlProkkaIDLOFKIB_35 (original name was: gnl|Prokka|IDLOFKIB_35)

Compact view

gnlProkkaIDLOFKIB_1 - Region 1 - T3PKS

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Location: 147,522 - 188,691 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIDLOFKIB_13 - Region 1 - cyclic-lactone-autoinducer

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Location: 186,530 - 207,235 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIDLOFKIB_28 - Region 1 - terpene

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Location: 30,280 - 51,161 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIDLOFKIB_36 - Region 1 - RiPP-like

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Location: 66,905 - 79,055 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.