prokka_result - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJHJLAHHE_4 (original name was: gnl|Prokka|JHJLAHHE_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	T3PKS	389,108	413,622

gnlProkkaJHJLAHHE_15 (original name was: gnl|Prokka|JHJLAHHE_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	107,138	119,288

gnlProkkaJHJLAHHE_20 (original name was: gnl|Prokka|JHJLAHHE_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	terpene	229,741	250,622

gnlProkkaJHJLAHHE_36 (original name was: gnl|Prokka|JHJLAHHE_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	cyclic-lactone-autoinducer	195,940	216,645

Region	Type	From	To	Similarity
Region 3.1	T3PKS	389,108	413,622
Region 11.1	RiPP-like	107,138	119,288
Region 15.1	terpene	229,741	250,622
Region 28.1	cyclic-lactone-autoinducer	195,940	216,645

No secondary metabolite regions were found in these records:: gnlProkkaJHJLAHHE_1 (original name was: gnl|Prokka|JHJLAHHE_1); gnlProkkaJHJLAHHE_3 (original name was: gnl|Prokka|JHJLAHHE_3); gnlProkkaJHJLAHHE_5 (original name was: gnl|Prokka|JHJLAHHE_5); gnlProkkaJHJLAHHE_7 (original name was: gnl|Prokka|JHJLAHHE_7); gnlProkkaJHJLAHHE_8 (original name was: gnl|Prokka|JHJLAHHE_8); gnlProkkaJHJLAHHE_9 (original name was: gnl|Prokka|JHJLAHHE_9); gnlProkkaJHJLAHHE_10 (original name was: gnl|Prokka|JHJLAHHE_10); gnlProkkaJHJLAHHE_11 (original name was: gnl|Prokka|JHJLAHHE_11); gnlProkkaJHJLAHHE_13 (original name was: gnl|Prokka|JHJLAHHE_13); gnlProkkaJHJLAHHE_16 (original name was: gnl|Prokka|JHJLAHHE_16); gnlProkkaJHJLAHHE_17 (original name was: gnl|Prokka|JHJLAHHE_17); gnlProkkaJHJLAHHE_19 (original name was: gnl|Prokka|JHJLAHHE_19); gnlProkkaJHJLAHHE_21 (original name was: gnl|Prokka|JHJLAHHE_21); gnlProkkaJHJLAHHE_22 (original name was: gnl|Prokka|JHJLAHHE_22); gnlProkkaJHJLAHHE_23 (original name was: gnl|Prokka|JHJLAHHE_23); gnlProkkaJHJLAHHE_24 (original name was: gnl|Prokka|JHJLAHHE_24); gnlProkkaJHJLAHHE_25 (original name was: gnl|Prokka|JHJLAHHE_25); gnlProkkaJHJLAHHE_26 (original name was: gnl|Prokka|JHJLAHHE_26); gnlProkkaJHJLAHHE_28 (original name was: gnl|Prokka|JHJLAHHE_28); gnlProkkaJHJLAHHE_29 (original name was: gnl|Prokka|JHJLAHHE_29); gnlProkkaJHJLAHHE_30 (original name was: gnl|Prokka|JHJLAHHE_30); gnlProkkaJHJLAHHE_31 (original name was: gnl|Prokka|JHJLAHHE_31); gnlProkkaJHJLAHHE_34 (original name was: gnl|Prokka|JHJLAHHE_34); gnlProkkaJHJLAHHE_35 (original name was: gnl|Prokka|JHJLAHHE_35); gnlProkkaJHJLAHHE_37 (original name was: gnl|Prokka|JHJLAHHE_37); gnlProkkaJHJLAHHE_38 (original name was: gnl|Prokka|JHJLAHHE_38)

Compact view

gnlProkkaJHJLAHHE_4 - Region 1 - T3PKS

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Location: 389,108 - 413,622 nt. (total: 24,515 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJHJLAHHE_15 - Region 1 - RiPP-like

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Location: 107,138 - 119,288 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJHJLAHHE_20 - Region 1 - terpene

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Location: 229,741 - 250,622 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJHJLAHHE_36 - Region 1 - cyclic-lactone-autoinducer

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Location: 195,940 - 216,645 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.