prokka_result - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOCHGMDOC_36 (original name was: gnl|Prokka|OCHGMDOC_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T3PKS	30,651	71,820

gnlProkkaOCHGMDOC_86 (original name was: gnl|Prokka|OCHGMDOC_86)

Region	Type	From	To	Most similar known cluster		Similarity
Region 75.1	RiPP-like	6,384	17,532

gnlProkkaOCHGMDOC_91 (original name was: gnl|Prokka|OCHGMDOC_91)

Region	Type	From	To	Most similar known cluster		Similarity
Region 79.1	terpene	22,023	42,533

gnlProkkaOCHGMDOC_109 (original name was: gnl|Prokka|OCHGMDOC_109)

Region	Type	From	To	Most similar known cluster		Similarity
Region 94.1	cyclic-lactone-autoinducer	90,723	110,405

Region	Type	From	To	Similarity
Region 33.1	T3PKS	30,651	71,820
Region 75.1	RiPP-like	6,384	17,532
Region 79.1	terpene	22,023	42,533
Region 94.1	cyclic-lactone-autoinducer	90,723	110,405

No secondary metabolite regions were found in these records:: gnlProkkaOCHGMDOC_1 (original name was: gnl|Prokka|OCHGMDOC_1); gnlProkkaOCHGMDOC_2 (original name was: gnl|Prokka|OCHGMDOC_2); gnlProkkaOCHGMDOC_3 (original name was: gnl|Prokka|OCHGMDOC_3); gnlProkkaOCHGMDOC_4 (original name was: gnl|Prokka|OCHGMDOC_4); gnlProkkaOCHGMDOC_5 (original name was: gnl|Prokka|OCHGMDOC_5); gnlProkkaOCHGMDOC_6 (original name was: gnl|Prokka|OCHGMDOC_6); gnlProkkaOCHGMDOC_7 (original name was: gnl|Prokka|OCHGMDOC_7); gnlProkkaOCHGMDOC_8 (original name was: gnl|Prokka|OCHGMDOC_8); gnlProkkaOCHGMDOC_9 (original name was: gnl|Prokka|OCHGMDOC_9); gnlProkkaOCHGMDOC_10 (original name was: gnl|Prokka|OCHGMDOC_10); gnlProkkaOCHGMDOC_11 (original name was: gnl|Prokka|OCHGMDOC_11); gnlProkkaOCHGMDOC_12 (original name was: gnl|Prokka|OCHGMDOC_12); gnlProkkaOCHGMDOC_14 (original name was: gnl|Prokka|OCHGMDOC_14); gnlProkkaOCHGMDOC_15 (original name was: gnl|Prokka|OCHGMDOC_15); gnlProkkaOCHGMDOC_16 (original name was: gnl|Prokka|OCHGMDOC_16); gnlProkkaOCHGMDOC_17 (original name was: gnl|Prokka|OCHGMDOC_17); gnlProkkaOCHGMDOC_18 (original name was: gnl|Prokka|OCHGMDOC_18); gnlProkkaOCHGMDOC_19 (original name was: gnl|Prokka|OCHGMDOC_19); gnlProkkaOCHGMDOC_20 (original name was: gnl|Prokka|OCHGMDOC_20); gnlProkkaOCHGMDOC_21 (original name was: gnl|Prokka|OCHGMDOC_21); gnlProkkaOCHGMDOC_22 (original name was: gnl|Prokka|OCHGMDOC_22); gnlProkkaOCHGMDOC_23 (original name was: gnl|Prokka|OCHGMDOC_23); gnlProkkaOCHGMDOC_24 (original name was: gnl|Prokka|OCHGMDOC_24); gnlProkkaOCHGMDOC_25 (original name was: gnl|Prokka|OCHGMDOC_25); gnlProkkaOCHGMDOC_26 (original name was: gnl|Prokka|OCHGMDOC_26); gnlProkkaOCHGMDOC_27 (original name was: gnl|Prokka|OCHGMDOC_27); gnlProkkaOCHGMDOC_29 (original name was: gnl|Prokka|OCHGMDOC_29); gnlProkkaOCHGMDOC_31 (original name was: gnl|Prokka|OCHGMDOC_31); gnlProkkaOCHGMDOC_32 (original name was: gnl|Prokka|OCHGMDOC_32); gnlProkkaOCHGMDOC_33 (original name was: gnl|Prokka|OCHGMDOC_33); gnlProkkaOCHGMDOC_34 (original name was: gnl|Prokka|OCHGMDOC_34); gnlProkkaOCHGMDOC_35 (original name was: gnl|Prokka|OCHGMDOC_35); gnlProkkaOCHGMDOC_37 (original name was: gnl|Prokka|OCHGMDOC_37); gnlProkkaOCHGMDOC_38 (original name was: gnl|Prokka|OCHGMDOC_38); gnlProkkaOCHGMDOC_39 (original name was: gnl|Prokka|OCHGMDOC_39); gnlProkkaOCHGMDOC_40 (original name was: gnl|Prokka|OCHGMDOC_40); gnlProkkaOCHGMDOC_41 (original name was: gnl|Prokka|OCHGMDOC_41); gnlProkkaOCHGMDOC_42 (original name was: gnl|Prokka|OCHGMDOC_42); gnlProkkaOCHGMDOC_44 (original name was: gnl|Prokka|OCHGMDOC_44); gnlProkkaOCHGMDOC_45 (original name was: gnl|Prokka|OCHGMDOC_45); gnlProkkaOCHGMDOC_46 (original name was: gnl|Prokka|OCHGMDOC_46); gnlProkkaOCHGMDOC_47 (original name was: gnl|Prokka|OCHGMDOC_47); gnlProkkaOCHGMDOC_48 (original name was: gnl|Prokka|OCHGMDOC_48); gnlProkkaOCHGMDOC_50 (original name was: gnl|Prokka|OCHGMDOC_50); gnlProkkaOCHGMDOC_51 (original name was: gnl|Prokka|OCHGMDOC_51); gnlProkkaOCHGMDOC_52 (original name was: gnl|Prokka|OCHGMDOC_52); gnlProkkaOCHGMDOC_53 (original name was: gnl|Prokka|OCHGMDOC_53); gnlProkkaOCHGMDOC_54 (original name was: gnl|Prokka|OCHGMDOC_54); gnlProkkaOCHGMDOC_56 (original name was: gnl|Prokka|OCHGMDOC_56); gnlProkkaOCHGMDOC_58 (original name was: gnl|Prokka|OCHGMDOC_58); gnlProkkaOCHGMDOC_59 (original name was: gnl|Prokka|OCHGMDOC_59); gnlProkkaOCHGMDOC_60 (original name was: gnl|Prokka|OCHGMDOC_60); gnlProkkaOCHGMDOC_62 (original name was: gnl|Prokka|OCHGMDOC_62); gnlProkkaOCHGMDOC_63 (original name was: gnl|Prokka|OCHGMDOC_63); gnlProkkaOCHGMDOC_64 (original name was: gnl|Prokka|OCHGMDOC_64); gnlProkkaOCHGMDOC_66 (original name was: gnl|Prokka|OCHGMDOC_66); gnlProkkaOCHGMDOC_67 (original name was: gnl|Prokka|OCHGMDOC_67); gnlProkkaOCHGMDOC_68 (original name was: gnl|Prokka|OCHGMDOC_68); gnlProkkaOCHGMDOC_70 (original name was: gnl|Prokka|OCHGMDOC_70); gnlProkkaOCHGMDOC_71 (original name was: gnl|Prokka|OCHGMDOC_71); gnlProkkaOCHGMDOC_72 (original name was: gnl|Prokka|OCHGMDOC_72); gnlProkkaOCHGMDOC_73 (original name was: gnl|Prokka|OCHGMDOC_73); gnlProkkaOCHGMDOC_74 (original name was: gnl|Prokka|OCHGMDOC_74); gnlProkkaOCHGMDOC_75 (original name was: gnl|Prokka|OCHGMDOC_75); gnlProkkaOCHGMDOC_76 (original name was: gnl|Prokka|OCHGMDOC_76); gnlProkkaOCHGMDOC_77 (original name was: gnl|Prokka|OCHGMDOC_77); gnlProkkaOCHGMDOC_78 (original name was: gnl|Prokka|OCHGMDOC_78); gnlProkkaOCHGMDOC_79 (original name was: gnl|Prokka|OCHGMDOC_79); gnlProkkaOCHGMDOC_80 (original name was: gnl|Prokka|OCHGMDOC_80); gnlProkkaOCHGMDOC_81 (original name was: gnl|Prokka|OCHGMDOC_81); gnlProkkaOCHGMDOC_82 (original name was: gnl|Prokka|OCHGMDOC_82); gnlProkkaOCHGMDOC_84 (original name was: gnl|Prokka|OCHGMDOC_84); gnlProkkaOCHGMDOC_85 (original name was: gnl|Prokka|OCHGMDOC_85); gnlProkkaOCHGMDOC_88 (original name was: gnl|Prokka|OCHGMDOC_88); gnlProkkaOCHGMDOC_89 (original name was: gnl|Prokka|OCHGMDOC_89); gnlProkkaOCHGMDOC_90 (original name was: gnl|Prokka|OCHGMDOC_90); gnlProkkaOCHGMDOC_92 (original name was: gnl|Prokka|OCHGMDOC_92); gnlProkkaOCHGMDOC_93 (original name was: gnl|Prokka|OCHGMDOC_93); gnlProkkaOCHGMDOC_94 (original name was: gnl|Prokka|OCHGMDOC_94); gnlProkkaOCHGMDOC_95 (original name was: gnl|Prokka|OCHGMDOC_95); gnlProkkaOCHGMDOC_96 (original name was: gnl|Prokka|OCHGMDOC_96); gnlProkkaOCHGMDOC_97 (original name was: gnl|Prokka|OCHGMDOC_97); gnlProkkaOCHGMDOC_98 (original name was: gnl|Prokka|OCHGMDOC_98); gnlProkkaOCHGMDOC_100 (original name was: gnl|Prokka|OCHGMDOC_100); gnlProkkaOCHGMDOC_101 (original name was: gnl|Prokka|OCHGMDOC_101); gnlProkkaOCHGMDOC_102 (original name was: gnl|Prokka|OCHGMDOC_102); gnlProkkaOCHGMDOC_104 (original name was: gnl|Prokka|OCHGMDOC_104); gnlProkkaOCHGMDOC_105 (original name was: gnl|Prokka|OCHGMDOC_105); gnlProkkaOCHGMDOC_107 (original name was: gnl|Prokka|OCHGMDOC_107); gnlProkkaOCHGMDOC_108 (original name was: gnl|Prokka|OCHGMDOC_108); gnlProkkaOCHGMDOC_111 (original name was: gnl|Prokka|OCHGMDOC_111); gnlProkkaOCHGMDOC_112 (original name was: gnl|Prokka|OCHGMDOC_112); gnlProkkaOCHGMDOC_113 (original name was: gnl|Prokka|OCHGMDOC_113); gnlProkkaOCHGMDOC_114 (original name was: gnl|Prokka|OCHGMDOC_114); gnlProkkaOCHGMDOC_115 (original name was: gnl|Prokka|OCHGMDOC_115); gnlProkkaOCHGMDOC_116 (original name was: gnl|Prokka|OCHGMDOC_116); gnlProkkaOCHGMDOC_117 (original name was: gnl|Prokka|OCHGMDOC_117); gnlProkkaOCHGMDOC_118 (original name was: gnl|Prokka|OCHGMDOC_118); gnlProkkaOCHGMDOC_119 (original name was: gnl|Prokka|OCHGMDOC_119); gnlProkkaOCHGMDOC_121 (original name was: gnl|Prokka|OCHGMDOC_121); gnlProkkaOCHGMDOC_122 (original name was: gnl|Prokka|OCHGMDOC_122); gnlProkkaOCHGMDOC_123 (original name was: gnl|Prokka|OCHGMDOC_123); gnlProkkaOCHGMDOC_124 (original name was: gnl|Prokka|OCHGMDOC_124)

Compact view

gnlProkkaOCHGMDOC_36 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 30,651 - 71,820 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOCHGMDOC_86 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 6,384 - 17,532 nt. (total: 11,149 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOCHGMDOC_91 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 22,023 - 42,533 nt. (total: 20,511 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOCHGMDOC_109 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 90,723 - 110,405 nt. (total: 19,683 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.