prokka_result - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCFPELGCE_2 (original name was: gnl|Prokka|CFPELGCE_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	100,531	121,412

gnlProkkaCFPELGCE_9 (original name was: gnl|Prokka|CFPELGCE_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	cyclic-lactone-autoinducer	195,934	216,639

gnlProkkaCFPELGCE_11 (original name was: gnl|Prokka|CFPELGCE_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	1	9,172

gnlProkkaCFPELGCE_23 (original name was: gnl|Prokka|CFPELGCE_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	28,477	54,278

Region	Type	From	To	Similarity
Region 2.1	terpene	100,531	121,412
Region 9.1	cyclic-lactone-autoinducer	195,934	216,639
Region 11.1	RiPP-like	1	9,172
Region 22.1	T3PKS	28,477	54,278

No secondary metabolite regions were found in these records:: gnlProkkaCFPELGCE_1 (original name was: gnl|Prokka|CFPELGCE_1); gnlProkkaCFPELGCE_3 (original name was: gnl|Prokka|CFPELGCE_3); gnlProkkaCFPELGCE_4 (original name was: gnl|Prokka|CFPELGCE_4); gnlProkkaCFPELGCE_5 (original name was: gnl|Prokka|CFPELGCE_5); gnlProkkaCFPELGCE_6 (original name was: gnl|Prokka|CFPELGCE_6); gnlProkkaCFPELGCE_7 (original name was: gnl|Prokka|CFPELGCE_7); gnlProkkaCFPELGCE_8 (original name was: gnl|Prokka|CFPELGCE_8); gnlProkkaCFPELGCE_10 (original name was: gnl|Prokka|CFPELGCE_10); gnlProkkaCFPELGCE_12 (original name was: gnl|Prokka|CFPELGCE_12); gnlProkkaCFPELGCE_14 (original name was: gnl|Prokka|CFPELGCE_14); gnlProkkaCFPELGCE_15 (original name was: gnl|Prokka|CFPELGCE_15); gnlProkkaCFPELGCE_16 (original name was: gnl|Prokka|CFPELGCE_16); gnlProkkaCFPELGCE_17 (original name was: gnl|Prokka|CFPELGCE_17); gnlProkkaCFPELGCE_18 (original name was: gnl|Prokka|CFPELGCE_18); gnlProkkaCFPELGCE_19 (original name was: gnl|Prokka|CFPELGCE_19); gnlProkkaCFPELGCE_20 (original name was: gnl|Prokka|CFPELGCE_20); gnlProkkaCFPELGCE_21 (original name was: gnl|Prokka|CFPELGCE_21); gnlProkkaCFPELGCE_22 (original name was: gnl|Prokka|CFPELGCE_22); gnlProkkaCFPELGCE_24 (original name was: gnl|Prokka|CFPELGCE_24); gnlProkkaCFPELGCE_25 (original name was: gnl|Prokka|CFPELGCE_25); gnlProkkaCFPELGCE_26 (original name was: gnl|Prokka|CFPELGCE_26); gnlProkkaCFPELGCE_27 (original name was: gnl|Prokka|CFPELGCE_27); gnlProkkaCFPELGCE_28 (original name was: gnl|Prokka|CFPELGCE_28); gnlProkkaCFPELGCE_29 (original name was: gnl|Prokka|CFPELGCE_29); gnlProkkaCFPELGCE_30 (original name was: gnl|Prokka|CFPELGCE_30); gnlProkkaCFPELGCE_31 (original name was: gnl|Prokka|CFPELGCE_31)

Compact view

gnlProkkaCFPELGCE_2 - Region 1 - terpene

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Location: 100,531 - 121,412 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCFPELGCE_9 - Region 1 - cyclic-lactone-autoinducer

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Location: 195,934 - 216,639 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCFPELGCE_11 - Region 1 - RiPP-like

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Location: 1 - 9,172 nt. (total: 9,172 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCFPELGCE_23 - Region 1 - T3PKS

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Location: 28,477 - 54,278 nt. (total: 25,802 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.