prokka_result - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJCJINCFK_6 (original name was: gnl|Prokka|JCJINCFK_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	346,091	371,665

gnlProkkaJCJINCFK_16 (original name was: gnl|Prokka|JCJINCFK_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	terpene	31,659	52,540

gnlProkkaJCJINCFK_24 (original name was: gnl|Prokka|JCJINCFK_24)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	93,887	106,037

gnlProkkaJCJINCFK_26 (original name was: gnl|Prokka|JCJINCFK_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	cyclic-lactone-autoinducer	6,235	26,940

Region	Type	From	To	Similarity
Region 6.1	T3PKS	346,091	371,665
Region 16.1	terpene	31,659	52,540
Region 23.1	RiPP-like	93,887	106,037
Region 25.1	cyclic-lactone-autoinducer	6,235	26,940

No secondary metabolite regions were found in these records:: gnlProkkaJCJINCFK_1 (original name was: gnl|Prokka|JCJINCFK_1); gnlProkkaJCJINCFK_2 (original name was: gnl|Prokka|JCJINCFK_2); gnlProkkaJCJINCFK_3 (original name was: gnl|Prokka|JCJINCFK_3); gnlProkkaJCJINCFK_4 (original name was: gnl|Prokka|JCJINCFK_4); gnlProkkaJCJINCFK_5 (original name was: gnl|Prokka|JCJINCFK_5); gnlProkkaJCJINCFK_7 (original name was: gnl|Prokka|JCJINCFK_7); gnlProkkaJCJINCFK_8 (original name was: gnl|Prokka|JCJINCFK_8); gnlProkkaJCJINCFK_9 (original name was: gnl|Prokka|JCJINCFK_9); gnlProkkaJCJINCFK_10 (original name was: gnl|Prokka|JCJINCFK_10); gnlProkkaJCJINCFK_11 (original name was: gnl|Prokka|JCJINCFK_11); gnlProkkaJCJINCFK_12 (original name was: gnl|Prokka|JCJINCFK_12); gnlProkkaJCJINCFK_13 (original name was: gnl|Prokka|JCJINCFK_13); gnlProkkaJCJINCFK_14 (original name was: gnl|Prokka|JCJINCFK_14); gnlProkkaJCJINCFK_15 (original name was: gnl|Prokka|JCJINCFK_15); gnlProkkaJCJINCFK_18 (original name was: gnl|Prokka|JCJINCFK_18); gnlProkkaJCJINCFK_19 (original name was: gnl|Prokka|JCJINCFK_19); gnlProkkaJCJINCFK_20 (original name was: gnl|Prokka|JCJINCFK_20); gnlProkkaJCJINCFK_21 (original name was: gnl|Prokka|JCJINCFK_21); gnlProkkaJCJINCFK_22 (original name was: gnl|Prokka|JCJINCFK_22); gnlProkkaJCJINCFK_23 (original name was: gnl|Prokka|JCJINCFK_23); gnlProkkaJCJINCFK_25 (original name was: gnl|Prokka|JCJINCFK_25); gnlProkkaJCJINCFK_27 (original name was: gnl|Prokka|JCJINCFK_27); gnlProkkaJCJINCFK_28 (original name was: gnl|Prokka|JCJINCFK_28); gnlProkkaJCJINCFK_29 (original name was: gnl|Prokka|JCJINCFK_29); gnlProkkaJCJINCFK_31 (original name was: gnl|Prokka|JCJINCFK_31); gnlProkkaJCJINCFK_32 (original name was: gnl|Prokka|JCJINCFK_32); gnlProkkaJCJINCFK_33 (original name was: gnl|Prokka|JCJINCFK_33); gnlProkkaJCJINCFK_34 (original name was: gnl|Prokka|JCJINCFK_34); gnlProkkaJCJINCFK_36 (original name was: gnl|Prokka|JCJINCFK_36); gnlProkkaJCJINCFK_37 (original name was: gnl|Prokka|JCJINCFK_37); gnlProkkaJCJINCFK_38 (original name was: gnl|Prokka|JCJINCFK_38)

Compact view

gnlProkkaJCJINCFK_6 - Region 1 - T3PKS

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Location: 346,091 - 371,665 nt. (total: 25,575 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJCJINCFK_16 - Region 1 - terpene

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Location: 31,659 - 52,540 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJCJINCFK_24 - Region 1 - RiPP-like

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Location: 93,887 - 106,037 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJCJINCFK_26 - Region 1 - cyclic-lactone-autoinducer

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Location: 6,235 - 26,940 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.