prokka_result - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPIFFBNMG_8 (original name was: gnl|Prokka|PIFFBNMG_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	terpene	101,687	122,568

gnlProkkaPIFFBNMG_45 (original name was: gnl|Prokka|PIFFBNMG_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	cyclic-lactone-autoinducer	32,895	53,600

gnlProkkaPIFFBNMG_55 (original name was: gnl|Prokka|PIFFBNMG_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	RiPP-like	106,836	117,351

gnlProkkaPIFFBNMG_56 (original name was: gnl|Prokka|PIFFBNMG_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	T3PKS	68,500	109,669

Region	Type	From	To	Similarity
Region 6.1	terpene	101,687	122,568
Region 36.1	cyclic-lactone-autoinducer	32,895	53,600
Region 44.1	RiPP-like	106,836	117,351
Region 45.1	T3PKS	68,500	109,669

No secondary metabolite regions were found in these records:: gnlProkkaPIFFBNMG_1 (original name was: gnl|Prokka|PIFFBNMG_1); gnlProkkaPIFFBNMG_3 (original name was: gnl|Prokka|PIFFBNMG_3); gnlProkkaPIFFBNMG_4 (original name was: gnl|Prokka|PIFFBNMG_4); gnlProkkaPIFFBNMG_5 (original name was: gnl|Prokka|PIFFBNMG_5); gnlProkkaPIFFBNMG_7 (original name was: gnl|Prokka|PIFFBNMG_7); gnlProkkaPIFFBNMG_9 (original name was: gnl|Prokka|PIFFBNMG_9); gnlProkkaPIFFBNMG_11 (original name was: gnl|Prokka|PIFFBNMG_11); gnlProkkaPIFFBNMG_13 (original name was: gnl|Prokka|PIFFBNMG_13); gnlProkkaPIFFBNMG_14 (original name was: gnl|Prokka|PIFFBNMG_14); gnlProkkaPIFFBNMG_15 (original name was: gnl|Prokka|PIFFBNMG_15); gnlProkkaPIFFBNMG_16 (original name was: gnl|Prokka|PIFFBNMG_16); gnlProkkaPIFFBNMG_17 (original name was: gnl|Prokka|PIFFBNMG_17); gnlProkkaPIFFBNMG_19 (original name was: gnl|Prokka|PIFFBNMG_19); gnlProkkaPIFFBNMG_20 (original name was: gnl|Prokka|PIFFBNMG_20); gnlProkkaPIFFBNMG_21 (original name was: gnl|Prokka|PIFFBNMG_21); gnlProkkaPIFFBNMG_22 (original name was: gnl|Prokka|PIFFBNMG_22); gnlProkkaPIFFBNMG_23 (original name was: gnl|Prokka|PIFFBNMG_23); gnlProkkaPIFFBNMG_24 (original name was: gnl|Prokka|PIFFBNMG_24); gnlProkkaPIFFBNMG_27 (original name was: gnl|Prokka|PIFFBNMG_27); gnlProkkaPIFFBNMG_28 (original name was: gnl|Prokka|PIFFBNMG_28); gnlProkkaPIFFBNMG_29 (original name was: gnl|Prokka|PIFFBNMG_29); gnlProkkaPIFFBNMG_30 (original name was: gnl|Prokka|PIFFBNMG_30); gnlProkkaPIFFBNMG_31 (original name was: gnl|Prokka|PIFFBNMG_31); gnlProkkaPIFFBNMG_32 (original name was: gnl|Prokka|PIFFBNMG_32); gnlProkkaPIFFBNMG_34 (original name was: gnl|Prokka|PIFFBNMG_34); gnlProkkaPIFFBNMG_36 (original name was: gnl|Prokka|PIFFBNMG_36); gnlProkkaPIFFBNMG_37 (original name was: gnl|Prokka|PIFFBNMG_37); gnlProkkaPIFFBNMG_38 (original name was: gnl|Prokka|PIFFBNMG_38); gnlProkkaPIFFBNMG_39 (original name was: gnl|Prokka|PIFFBNMG_39); gnlProkkaPIFFBNMG_40 (original name was: gnl|Prokka|PIFFBNMG_40); gnlProkkaPIFFBNMG_41 (original name was: gnl|Prokka|PIFFBNMG_41); gnlProkkaPIFFBNMG_42 (original name was: gnl|Prokka|PIFFBNMG_42); gnlProkkaPIFFBNMG_43 (original name was: gnl|Prokka|PIFFBNMG_43); gnlProkkaPIFFBNMG_44 (original name was: gnl|Prokka|PIFFBNMG_44); gnlProkkaPIFFBNMG_46 (original name was: gnl|Prokka|PIFFBNMG_46); gnlProkkaPIFFBNMG_48 (original name was: gnl|Prokka|PIFFBNMG_48); gnlProkkaPIFFBNMG_49 (original name was: gnl|Prokka|PIFFBNMG_49); gnlProkkaPIFFBNMG_50 (original name was: gnl|Prokka|PIFFBNMG_50); gnlProkkaPIFFBNMG_51 (original name was: gnl|Prokka|PIFFBNMG_51); gnlProkkaPIFFBNMG_52 (original name was: gnl|Prokka|PIFFBNMG_52); gnlProkkaPIFFBNMG_53 (original name was: gnl|Prokka|PIFFBNMG_53); gnlProkkaPIFFBNMG_57 (original name was: gnl|Prokka|PIFFBNMG_57); gnlProkkaPIFFBNMG_58 (original name was: gnl|Prokka|PIFFBNMG_58); gnlProkkaPIFFBNMG_59 (original name was: gnl|Prokka|PIFFBNMG_59)

Compact view

gnlProkkaPIFFBNMG_8 - Region 1 - terpene

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Location: 101,687 - 122,568 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPIFFBNMG_45 - Region 1 - cyclic-lactone-autoinducer

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Location: 32,895 - 53,600 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPIFFBNMG_55 - Region 1 - RiPP-like

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Location: 106,836 - 117,351 nt. (total: 10,516 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPIFFBNMG_56 - Region 1 - T3PKS

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Location: 68,500 - 109,669 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.