safety

Potential risk score of uploaded strain

ARGs	VFs	PGs	PRS
0	3	1	3.16

PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
FLHLAKDP_32	2738	3224	ygeG	0.0	ETT2	Effector delivery system	96.72	98.98	NP_311735
FLHLAKDP_32	1027	2403	ygeH	0.0	ETT2	Effector delivery system	94.77	100.00	NP_311736
FLHLAKDP_32	54	455	pbl	2.67e-168	ETT2	Effector delivery system	93.28	100.00	-
FLHLAKDP_64	1	787	neuE	0.0	K1 capsule	Invasion	99.62	68.49	WP_000197083

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
FLHLAKDP_58	1844	669	Hcp1	0.0	type VI secretion system protein	97.45	100.00	ARR33228

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
FLHLAKDP_10	7541	7694	Col156	154 / 154	96.75	NC009781
FLHLAKDP_69	928	1180	Col(MG828)	253 / 262	92.89	NC008486
FLHLAKDP_30	1	134	Col8282	134 / 207	91.79	DQ995352
FLHLAKDP_12	7640	7759	ColRNAI	121 / 130	89.26	DQ298019

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
FLHLAKDP_1	0.0	1.0	0.0
FLHLAKDP_2	0.0	1.0	0.0
FLHLAKDP_3	0.0	1.0	0.0
FLHLAKDP_4	1.0	0.0	1.0
FLHLAKDP_5	0.0	1.0	0.0
FLHLAKDP_6	0.0	1.0	0.0
FLHLAKDP_7	0.0	1.0	0.0
FLHLAKDP_8	0.0	1.0	0.0
FLHLAKDP_9	0.0	1.0	0.0
FLHLAKDP_10	1.0	0.0	1.0
FLHLAKDP_11	1.0	0.0	1.0
FLHLAKDP_12	1.0	0.0	1.0
FLHLAKDP_13	0.0	1.0	0.0
FLHLAKDP_14	0.0	1.0	0.0
FLHLAKDP_15	0.0	1.0	0.0
FLHLAKDP_16	0.0	1.0	0.0
FLHLAKDP_17	0.0	1.0	0.0
FLHLAKDP_18	0.0	1.0	0.0
FLHLAKDP_19	1.0	0.0	1.0
FLHLAKDP_20	1.0	0.0	1.0
FLHLAKDP_21	0.0	1.0	0.0
FLHLAKDP_22	1.0	0.0	1.0
FLHLAKDP_23	1.0	0.0	1.0
FLHLAKDP_24	1.0	0.0	1.0
FLHLAKDP_25	0.0	1.0	0.0
FLHLAKDP_26	0.0	1.0	0.0
FLHLAKDP_28	0.0	1.0	0.0
FLHLAKDP_29	0.0	1.0	0.0
FLHLAKDP_30	1.0	0.0	1.0
FLHLAKDP_31	0.0	1.0	0.0
FLHLAKDP_32	0.0	1.0	0.0
FLHLAKDP_33	1.0	0.0	1.0
FLHLAKDP_34	0.0	1.0	0.0
FLHLAKDP_35	0.0	1.0	0.0
FLHLAKDP_36	0.0	1.0	0.0
FLHLAKDP_37	0.0	1.0	0.0
FLHLAKDP_38	0.0	1.0	0.0
FLHLAKDP_39	0.0	1.0	0.0
FLHLAKDP_40	0.0	1.0	0.0
FLHLAKDP_41	1.0	0.0	1.0
FLHLAKDP_42	0.0	1.0	0.0
FLHLAKDP_43	0.0	1.0	0.0
FLHLAKDP_44	0.0	1.0	0.0
FLHLAKDP_45	0.0	1.0	0.0
FLHLAKDP_46	1.0	0.0	1.0
FLHLAKDP_47	0.0	1.0	0.0
FLHLAKDP_48	0.0	1.0	0.0
FLHLAKDP_49	0.0	1.0	0.0
FLHLAKDP_50	0.0	1.0	0.0
FLHLAKDP_51	1.0	0.0	1.0
FLHLAKDP_52	1.0	0.0	1.0
FLHLAKDP_53	0.0	1.0	0.0
FLHLAKDP_54	1.0	0.0	1.0
FLHLAKDP_55	0.0	1.0	0.0
FLHLAKDP_56	1.0	0.0	1.0
FLHLAKDP_57	1.0	0.0	1.0
FLHLAKDP_58	0.0	1.0	0.0
FLHLAKDP_59	1.0	0.0	1.0
FLHLAKDP_60	0.0	1.0	0.0
FLHLAKDP_61	0.0	1.0	0.0
FLHLAKDP_62	1.0	0.0	1.0
FLHLAKDP_63	0.0	1.0	0.0
FLHLAKDP_64	0.0	1.0	0.0
FLHLAKDP_65	0.0	1.0	0.0
FLHLAKDP_66	0.0	1.0	0.0
FLHLAKDP_67	1.0	0.0	1.0
FLHLAKDP_68	0.0	1.0	0.0
FLHLAKDP_69	1.0	0.0	1.0
FLHLAKDP_70	0.0	1.0	0.0
FLHLAKDP_71	1.0	0.0	1.0
FLHLAKDP_72	0.0	1.0	0.0
FLHLAKDP_73	0.0	1.0	0.0
FLHLAKDP_74	0.0	1.0	0.0
FLHLAKDP_75	0.0	1.0	0.0
FLHLAKDP_76	1.0	0.0	1.0
FLHLAKDP_77	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
No hit found