Potential risk score of uploaded strain

ARGs VFs PGs PRS
1022.24

PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
BNMJOEAG_4121334052tet(M)ARO:3000186tet(M)98.90100.00AB039845.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
BNMJOEAG_4121334052tet(M)Doxycycline, Tetracycline, Minocycline99.69100.00X75073

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
BNMJOEAG_4121334049tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX99.69100.00WP_011117014.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BNMJOEAG_1115331754021WalR1.63e-112transcriptional regulatory protein83.40100.00EPH95667
BNMJOEAG_245057150374CspR5.16e-33cold shock protein87.88100.00AAO82613

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BNMJOEAG_10.01.00.0
BNMJOEAG_20.01.00.0
BNMJOEAG_130.01.00.0
BNMJOEAG_240.01.00.0
BNMJOEAG_270.01.00.0
BNMJOEAG_280.01.00.0
BNMJOEAG_290.01.00.0
BNMJOEAG_300.01.00.0
BNMJOEAG_310.01.00.0
BNMJOEAG_320.01.00.0
BNMJOEAG_330.01.00.0
BNMJOEAG_340.01.00.0
BNMJOEAG_350.01.00.0
BNMJOEAG_360.01.00.0
BNMJOEAG_370.01.00.0
BNMJOEAG_380.01.00.0
BNMJOEAG_390.01.00.0
BNMJOEAG_400.01.00.0
BNMJOEAG_410.01.00.0
BNMJOEAG_420.01.00.0
BNMJOEAG_430.01.00.0
BNMJOEAG_440.01.00.0
BNMJOEAG_450.01.00.0
BNMJOEAG_460.01.00.0
BNMJOEAG_470.01.00.0
BNMJOEAG_480.01.00.0
BNMJOEAG_490.01.00.0
BNMJOEAG_500.01.00.0
BNMJOEAG_510.01.00.0
BNMJOEAG_521.00.01.0
BNMJOEAG_530.01.00.0
BNMJOEAG_540.01.00.0
BNMJOEAG_550.01.00.0
BNMJOEAG_560.01.00.0
BNMJOEAG_570.01.00.0
BNMJOEAG_581.00.01.0
BNMJOEAG_591.00.01.0
BNMJOEAG_600.01.00.0
BNMJOEAG_611.00.01.0
BNMJOEAG_621.00.01.0
BNMJOEAG_640.01.00.0
BNMJOEAG_651.00.01.0
BNMJOEAG_661.00.01.0
BNMJOEAG_670.01.00.0
BNMJOEAG_681.00.01.0
BNMJOEAG_701.00.01.0
BNMJOEAG_710.01.00.0
BNMJOEAG_721.00.01.0
BNMJOEAG_731.00.01.0
BNMJOEAG_741.00.01.0
BNMJOEAG_751.00.01.0
BNMJOEAG_761.00.01.0
BNMJOEAG_780.01.00.0
BNMJOEAG_890.01.00.0
BNMJOEAG_1000.01.00.0
BNMJOEAG_1110.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BNMJOEAG_24227998FalseSiphoviridaeVOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549, VOG10904, VOG4570, VOG0198, VOG3643, VOG3643, VOG6131, VOG2820, VOG9759, VOG9741, VOG4693, VOG6623, VOG9860, VOG9667, VOG11003, VOG0226, VOG4566, VOG0186, VOG1309
BNMJOEAG_271702729661FalseSiphoviridaeVOG1581, VOG4632, VOG4609, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589

Phigaro v2.4.0 (Database: Jan. 2024 release)

Insertion sequence (IS) elements