| ARGs | VFs | PGs | PRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JHJLAHHE_22 | 107037 | 107741 | WalR | 1.74e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JHJLAHHE_11 | 26229 | 26035 | CspR | 1.47e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JHJLAHHE_11 | 26229 | 26032 | CspA | 2.25e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JHJLAHHE_1 | 1.0 | 0.0 | 1.0 |
| JHJLAHHE_3 | 1.0 | 0.0 | 1.0 |
| JHJLAHHE_4 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_5 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_7 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_8 | 1.0 | 0.0 | 1.0 |
| JHJLAHHE_9 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_10 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_11 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_13 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_15 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_16 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_17 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_19 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_20 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_21 | 1.0 | 0.0 | 1.0 |
| JHJLAHHE_22 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_23 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_24 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_26 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_28 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_29 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_30 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_31 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_34 | 1.0 | 0.0 | 1.0 |
| JHJLAHHE_35 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_36 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_37 | 0.0 | 1.0 | 0.0 |
| JHJLAHHE_38 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JHJLAHHE_4 | 47293 | 81638 | False | Siphoviridae | VOG0535, VOG0322, VOG6545, VOG5046, VOG0189, VOG6005, VOG0198, VOG9667, VOG3699, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG6163, VOG4633, VOG4599, VOG4619, VOG4856, VOG9640, VOG0804, VOG4705, VOG4918, VOG0753, VOG0054, VOG0866 |
| JHJLAHHE_23 | 3762 | 8409 | False | Unknown | VOG9205, VOG0026, VOG0026, VOG0021, VOG1047, VOG7438 |
| JHJLAHHE_23 | 37208 | 68276 | False | Siphoviridae | VOG6495, VOG3622, VOG4552, VOG3711, VOG3459, VOG0650, VOG0685, VOG0283, VOG0226, VOG0514, VOG4799, VOG0198, VOG1154, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG5904, VOG4605, VOG4599, VOG10957 |
Phigaro v2.4.0 (Database: Jan. 2024 release)