safety

ARGs	VFs	PGs	PRS
0	0	2	2.00

PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HKDIFGKN_17	92208	92912	WalR	1.40e-114	transcriptional regulatory protein	84.25	100.00	EPH95667
HKDIFGKN_64	200337	200143	CspR	1.09e-29	cold shock protein	84.61	98.48	AAO82613
HKDIFGKN_64	200337	200140	CspA	1.67e-29	cold shock protein	84.85	100.00	CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
HKDIFGKN_1	4659	5594	rep28	937 / 936	96.58	CP005948

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
HKDIFGKN_1	1.0	0.0	1.0
HKDIFGKN_2	1.0	0.0	1.0
HKDIFGKN_3	1.0	0.0	1.0
HKDIFGKN_5	1.0	0.0	1.0
HKDIFGKN_6	1.0	0.0	1.0
HKDIFGKN_8	1.0	0.0	1.0
HKDIFGKN_9	1.0	0.0	1.0
HKDIFGKN_10	1.0	0.0	1.0
HKDIFGKN_11	0.0	1.0	0.0
HKDIFGKN_12	1.0	0.0	1.0
HKDIFGKN_13	0.0	1.0	0.0
HKDIFGKN_14	1.0	0.0	1.0
HKDIFGKN_15	0.0	1.0	0.0
HKDIFGKN_16	1.0	0.0	1.0
HKDIFGKN_17	0.0	1.0	0.0
HKDIFGKN_19	1.0	0.0	1.0
HKDIFGKN_21	0.0	1.0	0.0
HKDIFGKN_22	1.0	0.0	1.0
HKDIFGKN_23	1.0	0.0	1.0
HKDIFGKN_24	0.0	1.0	0.0
HKDIFGKN_25	0.0	1.0	0.0
HKDIFGKN_26	1.0	0.0	1.0
HKDIFGKN_29	1.0	0.0	1.0
HKDIFGKN_31	0.0	1.0	0.0
HKDIFGKN_33	0.0	1.0	0.0
HKDIFGKN_36	0.0	1.0	0.0
HKDIFGKN_37	1.0	0.0	1.0
HKDIFGKN_38	1.0	0.0	1.0
HKDIFGKN_39	1.0	0.0	1.0
HKDIFGKN_40	0.0	1.0	0.0
HKDIFGKN_41	1.0	0.0	1.0
HKDIFGKN_45	1.0	0.0	1.0
HKDIFGKN_46	0.0	1.0	0.0
HKDIFGKN_47	1.0	0.0	1.0
HKDIFGKN_49	0.0	1.0	0.0
HKDIFGKN_50	1.0	0.0	1.0
HKDIFGKN_51	0.0	1.0	0.0
HKDIFGKN_52	1.0	0.0	1.0
HKDIFGKN_53	0.0	1.0	0.0
HKDIFGKN_54	0.0	1.0	0.0
HKDIFGKN_55	0.0	1.0	0.0
HKDIFGKN_56	0.0	1.0	0.0
HKDIFGKN_58	1.0	0.0	1.0
HKDIFGKN_59	1.0	0.0	1.0
HKDIFGKN_60	1.0	0.0	1.0
HKDIFGKN_61	1.0	0.0	1.0
HKDIFGKN_63	1.0	0.0	1.0
HKDIFGKN_64	0.0	1.0	0.0
HKDIFGKN_65	0.0	1.0	0.0
HKDIFGKN_66	1.0	0.0	1.0
HKDIFGKN_67	0.0	1.0	0.0
HKDIFGKN_68	1.0	0.0	1.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
HKDIFGKN_13	6050	31050	False	Siphoviridae	VOG9667, VOG11077, VOG0181, VOG9667, VOG0535, VOG0283, VOG0226, VOG4855, VOG4552, VOG4693, VOG0586, VOG0198, VOG5709, VOG1183, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801
HKDIFGKN_41	2328	12257	False	Siphoviridae	VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG6414, VOG4609, VOG4632

Phigaro v2.4.0 (Database: Jan. 2024 release)