| ARGs | VFs | PGs | PRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CAGMFGLM_13 | 109376 | 110080 | WalR | 1.08e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| CAGMFGLM_5 | 88525 | 88331 | CspR | 8.33e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| CAGMFGLM_5 | 88525 | 88328 | CspA | 1.28e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CAGMFGLM_1 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_2 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_3 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_4 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_5 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_7 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_8 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_9 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_10 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_11 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_12 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_13 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_15 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_18 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_19 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_20 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_22 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_23 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_25 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_26 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_27 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_28 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_29 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_31 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_32 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_33 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_34 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_35 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_37 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_38 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_39 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_41 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_42 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_43 | 0.0 | 1.0 | 0.0 |
| CAGMFGLM_44 | 1.0 | 0.0 | 1.0 |
| CAGMFGLM_45 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CAGMFGLM_12 | 48247 | 82789 | False | Siphoviridae | VOG1191, VOG1521, VOG0054, VOG0753, VOG4615, VOG4783, VOG9998, VOG8870, VOG10972, VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG0468, VOG0741, VOG4841, VOG0198, VOG4799, VOG0514, VOG0226, VOG0283, VOG0685 |
| CAGMFGLM_20 | 5913 | 36332 | False | Siphoviridae | VOG4552, VOG4693, VOG0198, VOG3015, VOG1183, VOG0796, VOG4544, VOG0720, VOG7038, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294, VOG1637 |
Phigaro v2.4.0 (Database: Jan. 2024 release)