Potential risk score of uploaded strain

ARGs VFs PGs PRS
0022.00

PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
KMGJOBAE_33294701293997WalR2.07e-114transcriptional regulatory protein84.25100.00EPH95667
KMGJOBAE_54178429178235CspR2.36e-29cold shock protein84.6198.48AAO82613
KMGJOBAE_54178429178232CspA3.62e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
KMGJOBAE_5989910834rep28936 / 93699.89CP005948
KMGJOBAE_212335224452repUS731101 / 110196.00CP002654
KMGJOBAE_220603009repUS64954 / 95482.81JN601038

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
KMGJOBAE_11.00.01.0
KMGJOBAE_21.00.01.0
KMGJOBAE_31.00.01.0
KMGJOBAE_41.00.01.0
KMGJOBAE_51.00.01.0
KMGJOBAE_61.00.01.0
KMGJOBAE_71.00.01.0
KMGJOBAE_81.00.01.0
KMGJOBAE_91.00.01.0
KMGJOBAE_111.00.01.0
KMGJOBAE_121.00.01.0
KMGJOBAE_130.01.00.0
KMGJOBAE_141.00.01.0
KMGJOBAE_180.01.00.0
KMGJOBAE_190.01.00.0
KMGJOBAE_201.00.01.0
KMGJOBAE_211.00.01.0
KMGJOBAE_221.00.01.0
KMGJOBAE_230.01.00.0
KMGJOBAE_240.01.00.0
KMGJOBAE_250.01.00.0
KMGJOBAE_271.00.01.0
KMGJOBAE_281.00.01.0
KMGJOBAE_291.00.01.0
KMGJOBAE_301.00.01.0
KMGJOBAE_311.00.01.0
KMGJOBAE_321.00.01.0
KMGJOBAE_330.01.00.0
KMGJOBAE_341.00.01.0
KMGJOBAE_350.01.00.0
KMGJOBAE_361.00.01.0
KMGJOBAE_390.01.00.0
KMGJOBAE_401.00.01.0
KMGJOBAE_411.00.01.0
KMGJOBAE_421.00.01.0
KMGJOBAE_431.00.01.0
KMGJOBAE_450.01.00.0
KMGJOBAE_461.00.01.0
KMGJOBAE_470.01.00.0
KMGJOBAE_481.00.01.0
KMGJOBAE_490.01.00.0
KMGJOBAE_510.01.00.0
KMGJOBAE_521.00.01.0
KMGJOBAE_530.01.00.0
KMGJOBAE_540.01.00.0
KMGJOBAE_550.01.00.0
KMGJOBAE_560.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
KMGJOBAE_351781851936FalseSiphoviridaeVOG1637, VOG8294, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG0198, VOG4693, VOG4566, VOG0186, VOG1309, VOG7298, VOG0181, VOG6495
KMGJOBAE_356360574402FalseSiphoviridaeVOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632
KMGJOBAE_54438423654FalseSiphoviridaeVOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG10904, VOG4841, VOG0198, VOG1049, VOG3643, VOG3643
KMGJOBAE_553096035634FalseSiphoviridaeVOG4632, VOG7169, VOG4565, VOG4552, VOG3699, VOG9667

Phigaro v2.4.0 (Database: Jan. 2024 release)

Insertion sequence (IS) elements