| ARGs | VFs | PGs | PRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GFPDDBAO_6 | 443510 | 442806 | WalR | 2.86e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| GFPDDBAO_25 | 251470 | 251276 | CspR | 2.39e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| GFPDDBAO_25 | 251470 | 251273 | CspA | 3.66e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| GFPDDBAO_19 | 40980 | 41546 | rep38 | 572 / 903 | 90.91 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GFPDDBAO_1 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_2 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_3 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_4 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_5 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_6 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_8 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_10 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_11 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_13 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_14 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_15 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_16 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_17 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_18 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_19 | 1.0 | 0.0 | 1.0 |
| GFPDDBAO_20 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_21 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_22 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_23 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_25 | 0.0 | 1.0 | 0.0 |
| GFPDDBAO_26 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GFPDDBAO_5 | 13669 | 38263 | False | Siphoviridae | VOG0044, VOG0198, VOG4841, VOG0468, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0660, VOG4686, VOG4605, VOG4599, VOG10957 |
| GFPDDBAO_18 | 277593 | 291142 | False | Siphoviridae | VOG4632, VOG4609, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0204, VOG0198 |
| GFPDDBAO_18 | 299526 | 336217 | False | Siphoviridae | VOG1309, VOG0186, VOG4855, VOG0189, VOG4552, VOG4693, VOG0822, VOG0044, VOG3643, VOG0198, VOG9295, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG1353, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294, VOG1637 |
Phigaro v2.4.0 (Database: Jan. 2024 release)