| ARGs | VFs | PGs | PRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JNLJECOD_29 | 142605 | 143309 | WalR | 1.55e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JNLJECOD_37 | 89559 | 89365 | CspR | 4.26e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JNLJECOD_37 | 89559 | 89362 | CspA | 6.53e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JNLJECOD_8 | 3566 | 4235 | rep38 | 672 / 903 | 86.76 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JNLJECOD_1 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_2 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_3 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_4 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_5 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_7 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_8 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_10 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_12 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_13 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_14 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_15 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_17 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_18 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_19 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_20 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_21 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_23 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_24 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_26 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_27 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_28 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_29 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_30 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_31 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_32 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_33 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_34 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_35 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_36 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_37 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_38 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_39 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_40 | 0.0 | 1.0 | 0.0 |
| JNLJECOD_41 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_42 | 1.0 | 0.0 | 1.0 |
| JNLJECOD_43 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JNLJECOD_38 | 61196 | 88179 | False | Siphoviridae | VOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG0044 |
Phigaro v2.4.0 (Database: Jan. 2024 release)