Potential risk score of uploaded strain

ARGs VFs PGs PRS
0022.00

PRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PIFFBNMG_536058861292WalR7.16e-115transcriptional regulatory protein84.25100.00EPH95667
PIFFBNMG_19215219215025CspR2.47e-29cold shock protein84.6198.48AAO82613
PIFFBNMG_19215219215022CspA3.79e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
PIFFBNMG_346485505rep28858 / 93097.20CP003162

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
PIFFBNMG_11.00.01.0
PIFFBNMG_31.00.01.0
PIFFBNMG_40.01.00.0
PIFFBNMG_50.01.00.0
PIFFBNMG_70.01.00.0
PIFFBNMG_80.01.00.0
PIFFBNMG_90.01.00.0
PIFFBNMG_110.01.00.0
PIFFBNMG_130.01.00.0
PIFFBNMG_150.01.00.0
PIFFBNMG_160.01.00.0
PIFFBNMG_170.01.00.0
PIFFBNMG_190.01.00.0
PIFFBNMG_200.01.00.0
PIFFBNMG_211.00.01.0
PIFFBNMG_220.01.00.0
PIFFBNMG_230.01.00.0
PIFFBNMG_240.01.00.0
PIFFBNMG_271.00.01.0
PIFFBNMG_280.01.00.0
PIFFBNMG_301.00.01.0
PIFFBNMG_310.01.00.0
PIFFBNMG_320.01.00.0
PIFFBNMG_341.00.01.0
PIFFBNMG_360.01.00.0
PIFFBNMG_370.01.00.0
PIFFBNMG_381.00.01.0
PIFFBNMG_390.01.00.0
PIFFBNMG_400.01.00.0
PIFFBNMG_411.00.01.0
PIFFBNMG_421.00.01.0
PIFFBNMG_431.00.01.0
PIFFBNMG_440.01.00.0
PIFFBNMG_450.01.00.0
PIFFBNMG_460.01.00.0
PIFFBNMG_480.01.00.0
PIFFBNMG_490.01.00.0
PIFFBNMG_501.00.01.0
PIFFBNMG_510.01.00.0
PIFFBNMG_520.01.00.0
PIFFBNMG_530.01.00.0
PIFFBNMG_550.01.00.0
PIFFBNMG_560.01.00.0
PIFFBNMG_570.01.00.0
PIFFBNMG_580.01.00.0
PIFFBNMG_590.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
PIFFBNMG_193390456572FalseSiphoviridaeVOG8870, VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG7810, VOG4841
PIFFBNMG_2366260103958FalseSiphoviridaeVOG0054, VOG1637, VOG8294, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG0045, VOG0198, VOG1049, VOG3643, VOG0586, VOG1298, VOG11003, VOG5039, VOG9846, VOG4693, VOG4552, VOG4566, VOG0186, VOG1309, VOG0181

Phigaro v2.4.0 (Database: Jan. 2024 release)

Insertion sequence (IS) elements