Upload File Name:GCA_901830355.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PRS |
|---|---|---|---|
| 1 | 0 | 2 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBHNNFHC_35 | 1298 | 3217 | tet(M) | ARO:3000186 | tet(M) | 98.90 | 100.00 | AB039845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BBHNNFHC_35 | 1298 | 3217 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.69 | 100.00 | X75073 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBHNNFHC_35 | 1301 | 3217 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.69 | 100.00 | WP_011117014.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BBHNNFHC_24 | 4144 | 4848 | WalR | 9.56e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BBHNNFHC_13 | 50571 | 50374 | CspR | 4.01e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |